BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F09SP1|AL429780
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1716 1697 0.0
>3x_Contig1716
Length = 19108
Score = 1697 bits (853), Expect = 0.0
Identities = 858/863 (99%)
Strand = Plus / Minus
Query: 1 attggacccagtttggtatcaacatgtgcaagaagctattccgtgactatgacattcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2265 attggacccagtttggtatcaacatgtgcaagaagctattccgtgactatgacattcaat 2206
Query: 61 tgaaacatgacgggaaagagctcagagtaacaagcaaaatggatggtattgatcagatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2205 tgaaacatgacgggaaagagctcagagtaacaagcaaaatggatggtattgatcagatct 2146
Query: 121 tcgaattgaatgaggaagtggatgacgttgaaattatgggactacagttatccgatgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 tcgaattgaatgaggaagtggatgacgttgaaattatgggactacagttatccgatgact 2086
Query: 181 tgcatgatgctgttttgaaattacgtttgatcaagaaagaratgcaggaagaaaaagtga 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2085 tgcatgatgctgttttgaaattacgtttgatcaagaaagaaatgcaggaagaaaaagtga 2026
Query: 241 agagtgtacaatgtgaacacaaagaaagtgtgcacaagaaagaaccatctgaatttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2025 agagtgtacaatgtgaacacaaagaaagtgtgcacaagaaagaaccatctgaatttgaaa 1966
Query: 301 ctaaaaaaccttcccaagtcacagagagtaaagaaatcctcaaaaggaaaaaccgccatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1965 ctaaaaaaccttcccaagtcacagagagtaaagaaatcctcaaaaggaaaaaccgccatt 1906
Query: 361 atcatcaccaccactctaaaaacgagcccagaaataagacaaagagcaactccagaaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1905 atcatcaccaccactctaaaaacgagcccagaaataagacaaagagcaactccagaaagg 1846
Query: 421 tcaaaaaagttgaaaaagaattacccacttcggatgacgacaacacacagctagaagcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1845 tcaaaaaagttgaaaaagaattacccacttcggatgacgacaacacacagctagaagcat 1786
Query: 481 cgaagcctaaagcctttaagatcgacgtcctctttgactctagtgattctgaaaagtcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1785 cgaagcctaaagcctttaagatcgacgtcctctttgactctagtgattctgaaaagtcag 1726
Query: 541 agaataatgtcaactccagtwacaactacgacaatggagtttctccacccagaagaaact 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1725 agaataatgtcaactccagtaacaactacgacaatggagtttctccacccagaagaaact 1666
Query: 601 ccgcctcaagtgttaactcagtagtattggragaagttgaagacgaagaggtaagaagat 660
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1665 ccgcctcaagtgttaactcagtagtattggaagaagttgaagacgaagaggtaagaagat 1606
Query: 661 ggcaaarrtcgttgacgcaaacaccttctggtcactccgttttagaggatgtgtagaata 720
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1605 ggcaaaaatcgttgacgcaaacaccttctggtcactccgttttagaggatgtgtagaata 1546
Query: 721 gcataatttaaataatttacgaagaaatagatgtccgttgatggataagttttagttgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1545 gcataatttaaataatttacgaagaaatagatgtccgttgatggataagttttagttgtt 1486
Query: 781 catagccggcttgaggttaacctttcatgatacaatttctttcttggtggttacattttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 catagccggcttgaggttaacctttcatgatacaatttctttcttggtggttacattttc 1426
Query: 841 aactattcaataactttggacct 863
|||||||||||||||||||||||
Sbjct: 1425 aactattcaataactttggacct 1403
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7202
Number of Sequences: 1807
Number of extensions: 7202
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)